Actually the issue with Google Checkout shipping_methods.php was causing the strange display that looked like I was hacked.

I still have the issue with the shipping not updating, when edited in the shopping cart, once the customer reaches the checkout_payment page.

I am trying to find where I have it redirect to the checkout_payment page. It was not where I was thinking it was.

Having the redirect after all other code for checkout_shipping will resolve this issue, right?