As suggested by mc12345678 you'd better learn some css and use available tools, however since you asked ...
You need to remove the background color of various elements in your stylesheet.css and stylesheet_betterCategoriesEzInfo.css (both are in the css folder of your template).
Set them to transparent, you then might want to remove the borders as well.
Also you'll have a problem with the background images in h3.leftBoxHeading, h3.rightBoxHeading, and #headerWrapper.
For the logo you need to reduce the size of the image, and set it in includes/languages/english/YOUR_TEMPLATE/header.php
Line 41
Code:
#contentMainWrapper {
background-color: #fff;
}
Line 60
Code:
#headerWrapper {
background: #fff url("../images/header-bk.jpg") no-repeat scroll center top;
margin-top: 25px;
}
Line 148
Code:
#navColumnOne {
background-color: #fff;
padding-bottom: 20px;
}
Line 149 maybe you want to remove the whole column if you don't use it (admin > configuration > layout settings)
Code:
#navColumnTwo {
background-color: #fff;
padding-right: 3px;
}
Line 156
Code:
.sideBoxContent {
background-color: #fff;
border: 0 solid #e1e1e9;
padding: 0 0.4em 0.4em;
}
Line 6
Code:
.betterCategories, .betterDocuments, .betterEzpages, .betterInformation, .betterMoreinformation, .betterBestsellers {
border-top: 1px solid #ffffff;
}
Line 11
Code:
.betterCategories a, .betterCategories a:visited, .betterDocuments a, .betterDocuments a:visited, .betterEzpages a, .betterEzpages a:visited, .betterInformation a, .betterInformation a:visited, .betterMoreinformation a, .betterMoreinformation a:visited, .betterBestsellers a, .betterBestsellers a:visited {
background-color: #fffffe;
border-bottom: 1px solid #e36e95;
border-top: 2px solid #ffffff;
display: block;
padding: 4px;
}
To remove the dark pink area maybe it's easier for you to change this in stylesheet_footer_menu.css
Code:
#footer {
background-color: #e36e95;
clear: both;
margin: 0 0 30px;
padding-top: 10px;
}
with this
Code:
#footer {
background-color: #e36e95;
clear: both;
margin: 0 0 30px;
padding-top: 10px;
display: none;
}