I've read through your post several times now, and had a look at your site... and I still have no idea what you are asking us to help you with.
Could you be a little more specific about the "problem"? If you have deleted main_page stuff, then simply cerate it again on a "blank canvas" in the define_main_page editor.
Looking at your page source for that section, I see:
HTML Code:
<font color="#990000">
<strong><font color="#ff0000" size="4">
<font color="#006633" size="5">
<font color="#ff0000" size="4">
<font face="georgia,times new roman,times,serif">
</font>
</font>
</font>
</font>
</strong>
</font>
</em />
</font />
<p />
<p />
<p align="center" />
<p align="center">
<font color="#990000">
<strong>
<font color="#ff0000" size="4">
<font color="#006633" size="5">
<font color="#ff0000" size="4">
<font face="georgia,times new roman,times,serif">
<a href="http://www.pionusparrot.com/catalog/index.php?main_page=page&id=12">
</a>
</font>
</font>
</font>
</font>
</strong>
</font>
</p>
<div href="http://www.pionusparrot.com/catalog/index.php?main_page=discount_coupon"><a href="http://www.pionusparrot.com/catalog/index.php?main_page=discount_coupon"><img alt="Happy Mother's Day!" hspace="0" src="http://www.pionusparrot.com/images/MomsDay09.gif" align="textTop" border="0" /></a></a /></div><p><font face="georgia,times new roman,times,serif" color="#006600"></font></p><p><font face="georgia,times new roman,times,serif" color="#006600">Sorry but our page is out of wack so we will get it all aligned up soon!<br /></font><div></div><p align="center"><font size="1">Page Updated: 5/8/09<br />© 2009 Pionus Parrot</font></p><p /><p style="DIRECTION: ltr" align="center"><br /></p><p /><p /><p align="center"><font color="#0000ff" size="4"></font></p><p align="center"><font color="#0000ff" size="4">We have now transitioned into having two online stores, our "Jolly Balls & More!" site is now at this link ... </font><a href="http://www.pionusparrot.com/shop"><font color="#0000ff" size="4">www.pionusparrot.com/shop</font></a></p><p></td /></p><p></tr /></tbody /></table /></p><p /><p /><p align="center"><a href="http://www.pionusparrot.com/catalog/index.php?main_page=page&id=12"></a></p></font /></font /></font /></strong /><p align="left"><table style="WIDTH: 600px" cellspacing="4" cellpadding="4" border="0"><tbody><tr><td><p align="left"><font face="courier new,courier,monospace" size="4">We have made some changes here on our site for the bird toy/toy parts area. We no longer are selling "Toy Parts" on this site. We will have mainly Bird Toys, Food, Books and a few other items here on this site. Our "Jolly Ball Fun Ball" has Jolly Balls plus toy parts and a few otehr toys that are not on this site please use this link ... </font><a href="http://www.pionusparrot.com/shop">www.pionusparrot.com/shop</a></p></td></tr></tbody></table></p></td /></tr /></tbody /></table /></font /></font /></strong /></font /></p></div>
... so I am not surprised that what ends up in the browser is a bit of a mess!
Just re-create your home page stuff in a "clean" editor window of define_main_page.php
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