i would try adding a null into the end of all the insert values. it seems the structure of the table has changed:

Code:
INSERT INTO configuration VALUES
  (NULL, 'Enable on Category Pages', 'FILTER_CATEGORY', 'Yes', 'Enable the filter on category pages?', @cid, '10', now(), now(), NULL, "zen_cfg_select_option(array('Yes', 'No'),", NULL),
  (NULL, 'Enable on All Products Page', 'FILTER_ALL', 'Yes', 'Enable the filter on all products page?', @cid, '20', now(), now(), NULL, "zen_cfg_select_option(array('Yes', 'No'),", NULL),
  (NULL, 'Enable on New Products Page', 'FILTER_NEW', 'Yes', 'Enable the filter on new products page?', @cid, '30', now(), now(), NULL, "zen_cfg_select_option(array('Yes', 'No'),", NULL),
  (NULL, 'Enable on Featured Products Page', 'FILTER_FEATURED', 'Yes', 'Enable the filter on featured products page?', @cid, '40', now(), now(), NULL, "zen_cfg_select_option(array('Yes', 'No'),", NULL),
  (NULL, 'Enable on Specials Page', 'FILTER_SPECIALS', 'Yes', 'Enable the filter on specials page?', @cid, '50', now(), now(), NULL, "zen_cfg_select_option(array('Yes', 'No'),", NULL),
  (NULL, 'Enable on Search Page', 'FILTE[...]
etc...

although you will need to figure out what @cid is and replace accordingly if doing it manually....