At this point Zen Cart has to rely on whether the server administrator has properly configured the server to make compression features available.
All Zen Cart can do is tell PHP to "do it" ... which it does by setting the PHP configuration for zlib.output_compression to 1, and zlib.output_compression_level to whatever Gzip Compression Level you enter in your Admin settings.
After that, it's up to PHP to negotiate with Apache/Nginx/whatever and your browser.
If you've got specific technical suggestions on how Zen Cart can do this better "to conform to new apache versions", I'm all ears.
I just don't see where this is something Zen Cart can do anything about, because it happens at a different processing layer.
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