Quote Originally Posted by dontknowwhatimdoing View Post
I'm having this problem myself--URLs are not getting re-written in the source & I can't figure out why. Its producing unmodified query strings in my source instead of the new alias URLs. The 301 redirects are working to the new URLs but that's it.
I was just somehow randomly taken to this when clicking my email for this thread....but perhaps it is the solution...

Find includes/classes/ssu/cores/link.php and REPLACE the 2 instances of urlencode($value) by $value
I will try this later when I have time.